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Here $f_i$ is simply the number of times the character $i$ appears in the ciphertext of length $N$ and where $Z$ is the alphabet size. If you had ciphertext ADCXU ZMDYZ DXZUM and which was derived from English plaintext then $N=15$ and $f_A=1,f_B=0,f_C=1, f_D=3,\ldots, f_Z=2.$


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As explained on the link you posted, the Vigenere cipher with a key on length $n$ encrypts every $n$-th symbol with the same key under the Caesar cipher. So to calculate the IC you should take all the $n$ sub-sequences separately: $\{1, 1+n, \dots, 1+kn, \dots\}$, $\{2, 2+n, \dots, 2+kn, \dots\}$ and so on and compute the IC for every sub-sequence.



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