Since there are no answers here yet, I'll write down my own opinion so as to kickstart a discussion.
The Fiat-Shamir heuristic for augmenting Sigma-protocols (or possibly any 3-move honest-verifier ZKPoK?) works as follows: For the problem statement
X
$X$ and first prover messageA
$A$, the prover self-generates the challengee = H(X,A)
$e = H(X,A)$and uses it to generate its final responsez
$z$. Note that these proofs can be replayed.In Damgard's paper “Efficient Concurrent Zero-Knowledge in the Auxiliary String Model” the Common Reference String model is used to generate a trapdoor commitment scheme, enabling the verifier to simulate a proof and thus guaranteeing zero-knowledge. In this setting, since the prover still actively participates in the protocol and Special Soundness is assumed, the prover cannot cheat.
To me it seems that your conjecture is true. Given a collision-resistant hash function H$H$ (a criterion I think a PRF satisfies), digesting A
$A$ and the common reference string together should derive a ZKPoK out of a Sigma Protocol. But the thing is, that string should only be unique, and it is solely in the interest of the verifier that it be so. Therefore even a malicious verifier can be trusted to provide it properly, and the overhead of a CRS setup having to generate unique strings can be avoided.